Patient ID | Infection > 14 days | Infection > 21 days | Infection > 28 days | BAL culture | Relative abundance (%) at T0 by 16S | Relative abundance (%) at 7 days by 16S |
---|---|---|---|---|---|---|
17 |  +  |  +  |  +  | Klebsiella pneumoniae | n.f.* | n.f |
18 |  +  |  +  |  +  | Staphylococcus aureus Klebsiella pneumoniae | 49.1 n.f | 47.7 n.f |
21 | 0 |  +  |  +  | Pseudomonas aeruginosa Staphylococcus aureus | 0.8 12.9 | 0.4 43.8 |
23 | 0 |  +  |  +  | Staphylococcus aureus Acinetobacter baumannii Klebsiella pneumoniae | 3.4 31.6 n.f | 8.0 85.7 n.f |
24 | 0 |  +  |  +  | Acinetobacter baumannii | 9.1 | 0.3 |
25 | 0 |  +  |  +  | Pseudomonas aeruginosa Acinetobacter baumannii | 0.3 1.0 | 3.2 8.7 |
26 | 0 |  +  |  +  | Klebsiella oxytoca | n.f | n.f |
27 | 0 |  +  |  +  | Klebsiella pneumoniae | n.f | n.f |
28 | 0 | 0 |  +  | Staphylococcus aureus | 0.01 | 0.03 |
31 |  +  | 0 | 0 | Klebsiella pneumoniae | n.f | n.f |