How to approach genome wars in sepsis?

Sepsis continues to pose a clear challenge as one of the most difficult and costly problems to treat and prevent. Sepsis is caused by systemic or localized infections that damage the integrity of microcirculation in multiple organs. The challenge of sepsis and its long-term sequelae was addressed by the National Institutes of Health National Heart Lung and Blood Institute Division of Blood Diseases and Resources. Defining sepsis as severe endothelial dysfunction syndrome that causes multiorgan failure in response to intravascular or extravascular microbial agents, the National Heart Lung and Blood Institute panel proposed the concept of genome wars as a platform for new diagnostic, therapeutic, and preventive approaches to sepsis.

of $30.7 billion for biomedical research funded by the National Institutes of Health. Even worse, sepsis survivors suff er incapacitating cognitive impairment and functional disability, posing tremendous emotional and fi nancial challenges [4]. Sepsis undermines advances in medical and surgical management of multiple diseases [1]. While the worldwide Surviving Sepsis Campaign has developed excellent standards of care [5], the only US Food and Drug Administration-approved drug for adult severe sepsis -recombinant human activated protein C -was introduced a decade ago [6].
A report entitled 'Blood Systems Response to Sepsis' published online by the National Heart Lung and Blood Institute (NHLBI) Division of Blood Diseases and Resources addresses the challenge of sepsis and its long-term sequelae [7]. An interdisciplinary panel of experts analyzed the problem of sepsis in the context of a genomic approach to patients and their microbial invaders. An interrelationship between the host's genetic constitution and the invading pathogen's genetic prowess led to the concept of genome wars, which determine the outcome of sepsis (Figure 1). Decoding the molecular events at work in these genome wars is now economically feasible due, in part, to spectacular advances in genomic technologies -such as deep transcriptome, exome, and whole genome sequencing -that are currently available to individual investigators at a reasonable cost.
Th e close encounters of invading pathogens and the host's innate and adaptive immunity contribute to loss of homeostatic function of the microvascular endothelium in multiple organs. Th is loss is exemplifi ed by two major complications of sepsis: acute respiratory distress syndrome and disseminated intravascular coagulation. Why, how, and when these complications emerge in some but not other patients, contributing to irreversible multiorgan failure and death, are questions awaiting further study. In this context, the prevailing sepsis paradigm as systemic infl ammatory response to infection -commonly referred to as a cytokine storm -seems inadequate. Th e same elevated cytokines are recorded in a multitude of autoimmune diseases without the vascular collapse [8], while trials of anticytokine therapeutics were unsuccessful in treating sepsis [9]. Th e NHLBI report proposes the unifying concept of sepsis as a severe endothelial dysfunction syndrome that causes multiorgan Abstract Sepsis continues to pose a clear challenge as one of the most diffi cult and costly problems to treat and prevent. Sepsis is caused by systemic or localized infections that damage the integrity of microcirculation in multiple organs. The challenge of sepsis and its longterm sequelae was addressed by the National Institutes of Health National Heart Lung and Blood Institute Division of Blood Diseases and Resources. Defi ning sepsis as severe endothelial dysfunction syndrome that causes multiorgan failure in response to intravascular or extravascular microbial agents, the National Heart Lung and Blood Institute panel proposed the concept of genome wars as a platform for new diagnostic, therapeutic, and preventive approaches to sepsis. . Consistent with this concept, endothelial dysfunction leads to a widespread increase in vascular permeability [10].
Th e fi rst proposed approach is to harness state-of-theart genomic technologies for establishing landmarks of sepsis susceptibility, progression, and outcome. A growing number of genetic variations are being discovered in almost every known vanguard of innate and adaptive immunity. Th ese defenses are challenged by the extensive inter-species and intra-species genetic variability of diverse microbial pathogens that cause sepsis (Figure 1). Highly advanced genomic technologies and bioinformatics are likely to decode those polymorphic features to be utilized as new biomarkers for sepsis progression, prognosis, and personalized therapy.
Th e second proposed approach calls for a better understanding of the main theater of sepsis: the bloodtissue barrier, which is formed by the microvascular endothelium and adjoining structures. Cell and structural biology as well as molecular imaging applied to analysis of human and animal blood and vascular cells should be extended to organ-specifi c vascular beds [11]. Such analysis would correlate with changes in the coagulation and fi brinolysis systems, and the function of platelets, neutrophils, and other blood cells that stick to activated and damaged endothelium. New animal models are needed that more closely resemble human blood and vascular systems to facilitate translation of basic discoveries into bedside applications.
Th e third approach to solving the problem of sepsis focuses on the evolving interplay between pathogen and host to discover pathogen-specifi c or nonspecifi c turning points at which intervention can alter the course of sepsis before damage to vital organs becomes irreversible. Th ese poorly understood stochastic interactions (Figure 1) may explain why speed is life, because a 6-hour delay in starting antimicrobial therapy in patients with hypotension and infection correlated with dramatically higher mortality (7.6% decrease in survival per hour of delay) [12]. Moreover, a delay in implementation of the guidelines developed by the Surviving Sepsis Campaign resulted in higher mortality and longer ICU stay [13]. Th e NHLBI report off ers translational strategies to bridge basic science and clinical investigation to develop new therapies for sepsis.
Several years ago, the NHLBI-sponsored request for applications that funded 'Plasma Proteins with Potential Th erapeutic Usefulness' spawned the seminal studies for the only US Food and Drug Administration-approved drug for sepsis in adults -activated protein C [6]. A decade -and millions of sepsis victims -later, it is now essential to approach the sepsis genome wars with vigorous eff orts to translate emerging genomic information into new countermeasures. Sepsis is a towering public health problem worldwide, growing in magnitude as the population ages.
Abbreviations NHLBI, National Heart Lung and Blood Institute.

Competing interests
JH is the co-inventor on patents held by employer Vanderbilt University, and has not received any extra reimbursements and fees related to this article.

Authors' contributions
Both authors contributed to the conceptual development of this commentary, which was written by JH and edited by JMM. Figure 1. Trilateral framework for sepsis initiation, progression, and outcome. Patient's genome responds to sepsis-causing pathogen genome(s) while stochastic interactions infl uence the outcome of these encounters at the blood-tissue barrier.