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Table 1 Initial patients’ characteristics and outcomes

From: Oropharyngeal and intestinal concentrations of opportunistic pathogens are independently associated with death of SARS-CoV-2 critically ill adults

 

N (%) [IQR]

General characteristics

 Age, y

59.7 [49.3; 66.1]

 Sex, No. (%)

 

  Female

20 (21.1)

 Body Mass Index (BMI)

28.4 [24.7; 32.4]

 Medical history, No. (%)

46 (48.4)

  Diabetes

25 (26.3)

  Chronic heart failure

29 (30.5)

  Chronic respiratory failure

14 (14.7)

  Chronic renal failure

15 (15.8)

  Chronic hepatic failure

2 (2.1)

 Immunosuppression

23 (24.2)

  Organ transplantation

11 (47.8)

  Long-term steroid therapy

7 (30.4)

  HIV infection

3 (13.0)

  Other

13 (56.5)

Characteristics at admission

 Time from onset of the symptoms to ICU admission, days

11 [8; 15]

 SAPS 2

33 [24; 50]

 SOFA

6 [4; 8]

Treatment started within admission and inclusion

 Antibiotics

83 (87.4)

 Cephalosporins

43 (43.9)

 Macrolides

29 (29.6)

 Cotrimoxazole

9 (9.2)

 Ureido-penicillins

7 (7.1)

 Amino-penicillins

5 (5.1)

 Glycopeptides

3 (3.1)

 Ciprofloxacin

3 (3.1)

 Carbapenems

1 (1)

 Steroids

61 (64.2)

 Tocilizumab or Anakinra

28 (29.5)

 Lopinavir/ritonavir

40 (42.1)

 Remdesivir

15 (15.8)

Biological data at ICU admission

 Lymphocytes, /mm3

910 [620; 1220]

 C-reactive protein, mg/L

138 [65; 218]

 D-Dimer, ng/mL

1283.5 [682; 4455]

 Ferritin, µg/L

1352.5 [789; 2372]

 Interleukin-6, pg/mL

47.6 [20.5; 167.5]

  LDH, IU/L

481 [344; 638]

Support therapy in the first 48 h

 Acute respiratory support

 

  Noninvasive positive pressure ventilation, high-flow nasal canula

58 (61.1)

  Invasive positive pressure ventilation

27 (28.4)

  Invasive positive pressure ventilation and ECMO

10 (10.5)

 Renal replacement therapy

15 (15.8)

  Vasopressor agent support

41 (43.2)

 Medications during ICU stay

N (%)

  Steroids

61 (64.2)

  Aciclovir

19 (20)

  Ganciclovir

7 (7.4)

  Tocilizumab or Anakinra

39 (41.1)

Primary outcome

 

 Death at D90

42 (44.2)

Secondary outcomes

 

 Death in ICU

40 (42.1)

 Death in hospital

42 (44.2)

 Death at D42

40 (42.1)

Nosocomial infections

 Bloodstream infections

24 (25.3)

 Nosocomial pneumonia*

40 (42.1)

 Hospital-acquired pneumonia in non-ventilated patients

9 (9.5)

 Ventilator-acquired pneumonia

34 (35.8)

  1. SAPS 2, Simplified Acute Physiology Score; SOFA score, Sequential Organ Failure Assessment score; ECMO, Extracorporeal Membrane Oxygenation
  2. *Nosocomial pneumonia includes hospital-acquired pneumonia in non-ventilated patients and ventilator-associated pneumonia (40 patients will develop at least one episode of nosocomial pneumonia, including 34 with at least one episode of Ventilator-acquired pneumonia and 9 with at least one episode of Hospital-acquired pneumonia in non-ventilated patients)
  3. N = 95; no missing data