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Table 5 GSEA of transcription factor targets (TFT)

From: A longitudinal study highlights shared aspects of the transcriptomic response to cardiogenic and septic shock

Gene set (TFT)

CS_NES

SS_NES

CS_FDR.q.val

SS_FDR.q.val

DEGs_CS

DEGs_SS

Trend

CEBPB_02

− 1.80

− 1.87

0.08739

0.02342

23

56

Negative

E2F_Q3_01

1.99

1.64

0.00111

0.02955

20

54

Positive

E2F_Q4_01

1.89

1.87

0.00144

0.01000

20

57

Positive

E2F_Q6

1.95

1.55

0.00117

0.06391

18

58

Positive

E2F_Q6_01

1.93

1.65

0.00128

0.03002

20

54

Positive

E2F1_Q4_01

1.92

1.63

0.00123

0.03049

20

52

Positive

  1. For each gene set of TFT is reported: normalized enriched score, false discovery rate, the number of target genes differentially expressed in CS and SS, and the gene expression trend