Table 5 Sample sequences of cfDNA from severe sepsis patients
From: Prognostic utility and characterization of cell-free DNA in patients with severe sepsis
Name | Sequence | Source | Chromosome | GenBank Accession Number | Identity |
|---|---|---|---|---|---|
150-1 | AGAGTCTTGGCATCCATGATAAGTGGGGGTGAGCGGAGGGAAAGACCAAGCCCCAGGACAGCACACTGACCATTCCAGGAGCCAGCATGGGTGGCCCACACACATGGAAGAACTACAGCCCAGACAAGCAGGGCCGCACCAACAGAGGTCCTGCAG | Homo sapiens | Chromosome 5 genomic contig, reference assembly | NT_006713.14 | 100% |
150-2 | GATCCAGACCCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTGANACAGAN NCTTGCTCTGTCGCCAGGCTGGAGTGCAATGGCGCGATCTCAGCTCACTGCAACCTCCGCCCCCCGCCCCCCGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCACGATCC | Homo sapiens | Protein kinase C, α (PRKCA) on chromosome 17 | NG_012206.1 | 97% |
150-3 | CCTGATTTTCCAGGTGCCGTCTGTCACCCCTTTCTTTGACTAGGAAAGGGAACTCCCTGACCCCTTGCGCTTCCTGAGTGAGGCAATGCCTTGCCCTGCTTCGGCTCGCACACGGTGCGTGCACCCACTGACCTGCGCCCACTGTCTGG | Homo sapiens | Protein kinase, cAMP-dependent, catalytic, β (PRKACB) gene | DQ_667174.1 | 100% |
150-5 | CGCGGCGAGGGGGGTAAAAAGCCGCGTTGGCAAAAACCGCGGCGGCGGGGAGCAAAAAGCCGCCGCGGTGGGCGCAAAAAGTCGCCGCGGCCAAAAAGCCGTGCCGGTGGCGGCGGCGGCAAAAAGCCGCGGCGTCGGGGGCGGGG | Homo sapiens | Chromosome 21 genomic contig, reference assembly | NT_113952.1 | 100% |
150-6 | CCCGTAAAGACCCAGGTCACAGGCCACTGTGGCGGAGGGCAGACCCAGAGGCATGGTGACCGGTGCGGGAGAGGGCAGGCCAGCTTCAGGGTGCAGACCCCGCAGAAGCCCGGCTTCACTGGCTCCAGGGTTGTTGCAGGGGGG | Homo sapiens | Chromosome 1 genomic contig, reference assembly | NT_004487.18 | 100% |
150-7 | CCAGGCAGCCAGGGCGCGGCTGAGGTGGGGTGAGGAGGGAGCGCGGGGCGGGCCGTCCGCCTTGCGTGGGAAGCCGCACCCCCTGCAGATGCCGTGGGCGTTTGTCTCTGCCCCCCCCAGGCACCGGCATCGTCAGCCCAGG | Homo sapiens | Chromosome 16 genomic contig, reference assembly | NT_037887.4 | 100% |
150-8 | CCTGTGTGGCCGGAGCCTCCGCGATGAGCACTGCCCCCTGCTCCACGGCACCCAGTCCCATCAACCACCCAAGGGCTGAGGAGTGTGGGCTCATGGCACAGGACTGGCAAGCAGCTCCACCTGCAGCCCCAGTGCAGGATCCACTGGG | Homo sapiens | Chromosome 7 genomic contig, reference assembly | NT_007914.14 | 86% |
300-1 | GACCCATCTGGCCGCCTCCCGAGAGGCCATGGGCGCTGTGACTCCTTCATCTTGGCCTAGGAAGCACCAGCCTTCAGCTGCTCACGCCAGATTCTTGCAGACATTGCAACTCCTCTTTTTCTCGGCTCTACCTTCCACAAACATCCCCTGCTACTGCCAGGACCAGGCCCCGGCCCCGATCCCGGCCCGGTCCACCGCAGCCCATCCCCGCACTGGCTCCTTGCTGCCCCCGACCCTCCCAGCAGCCAGAGGGACTTTTCACC | Homo sapiens | Chromosome 9 genomic contig, reference assembly | NT_024000.16 | 100% |
300-2 | GATCCCCCTCCCAAGAAGCGCCCGGCCCGGGCCGGCCCAGCGGGAGCACCTGAGCTGTTCTGGGCCTCCAGCGTCCTGTGCCCTGCAGAGGCGGGTCCTAGGGAGGCAGAGCTGAGGTGGGGAGGTGGGGGACAGGTCTAGAGAGGATCAGGCACGGCGCGCCCTCGGCCAAGGGCCCCCACCCCAAACATTTCTCCCTGCTGGTCGGCCTTCTCGTTCCCACTCCGCAGGAACCACTGGAAGACAGGCTTCCGGGGAAAACGGCCTGGGGTTTACAAATAACCCAGGTC | Homo sapiens | Chromosome 11 genomic contig, alternate assembly | NW_001838025.2 | 100% |
300-3 | CCACACCTGGATCTGACTGCCCCANNGCCCTTCAGGGCCCTTTGAGGGGGTGATGGGGACAATGTGGAAAGAGGGGGAGGGAAGTTGGGGGGTCCTGCCCACAGCCCCTGCCTGTCTGCACCTCATGTCCCGCACACACACGCTCAGTGCCTGCCCTGAGGAGTGGCAGACCCATTTTACTTTCTTAGAGTAGAGGAGGAAGAGGTGCAGGAGGAAGGCCAGGTAGGAGGGCTGGTAGGGCCAGGGCACTCCCCACCACTGACTGCCCCAGAGGGTGACTTGGG | Homo sapiens | Chromosome 17 genomic contig, reference assembly | NT_010718.15 | 99% |
300-4 | AACCAGGCCTCAGGTGCAGGCCCCACATGACAGATGGACAGACTGAAGTGGGAGGTGGGAGGCGGACACCCCGGCGTCCTGCCAGGAAGGGACACCATCTGCACCTGGCGAGCTGTGGCCTCCAGCCATCGTTTCCCTGCCTAGTTAGGGGCTTTTCCCTCCAGAGCCCTGTCCACTCTGGCCTTGTTTCTGGAACTGCTCCTCACCCGGAGGACCCCATCCTTTCCGTGAAGCAGGCAGTGGGGGCTTTCTGGCAAGTGGCCTCTTCATTAACTATCCCAGAGTGAGTGCAGTC | Homo sapiens | Chromosome 16 genomic contig, reference assembly | NT_010498.15 | 100% |